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  5. AMTR_s00162p00029070

AMTR_s00162p00029070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00162.8

No description available


Gene families : OG0003498 (Archaeplastida) Phylogenetic Tree(s): OG0003498_tree ,
OG_05_0003098 (LandPlants) Phylogenetic Tree(s): OG_05_0003098_tree ,
OG_06_0002517 (SeedPlants) Phylogenetic Tree(s): OG_06_0002517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00162p00029070
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AT4G01000 No alias Ubiquitin-like superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00000204.29 No alias No description available 0.02 Archaeplastida
GSVIVT01027093001 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009668 plastid membrane organization IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010027 thylakoid membrane organization IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR024974 Sde2_N 5 152
No external refs found!