1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00163p00017620

AMTR_s00163p00017620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00163.4

No description available


Gene families : OG0000997 (Archaeplastida) Phylogenetic Tree(s): OG0000997_tree ,
OG_05_0000601 (LandPlants) Phylogenetic Tree(s): OG_05_0000601_tree ,
OG_06_0000347 (SeedPlants) Phylogenetic Tree(s): OG_06_0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00163p00017620
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00250060 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00024p00111840 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00039p00159070 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00047p00187680 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00053p00054600 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00062p00072320 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00080p00090430 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00108p00146880 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!