AMTR_s00163p00072710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00163.29

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase


Gene families : OG0005007 (Archaeplastida) Phylogenetic Tree(s): OG0005007_tree ,
OG_05_0005952 (LandPlants) Phylogenetic Tree(s): OG_05_0005952_tree ,
OG_06_0005046 (SeedPlants) Phylogenetic Tree(s): OG_06_0005046_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00163p00072710
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020930.14 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Cre02.g079600 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Gb_17164 No alias phenylalanine-tRNA ligase 0.03 Archaeplastida
MA_12107g0010 No alias phenylalanine-tRNA ligase 0.03 Archaeplastida
Mp2g23280.1 No alias phenylalanine-tRNA ligase 0.02 Archaeplastida
Smo165421 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Solyc05g056260.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019889_P001 No alias phenylalanine-tRNA ligase 0.04 Archaeplastida
Zm00001e029091_P001 No alias phenylalanine-tRNA ligase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004826 phenylalanine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEA Interproscan
BP GO:0008033 tRNA processing IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0016108 tetraterpenoid metabolic process IEP Neighborhood
BP GO:0016109 tetraterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016116 carotenoid metabolic process IEP Neighborhood
BP GO:0016117 carotenoid biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005121 Fdx_antiC-bd 349 438
IPR002319 Phenylalanyl-tRNA_Synthase 135 336
No external refs found!