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  5. AMTR_s00168p00058210

AMTR_s00168p00058210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00168.21

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.E-class RAB GTPase


Gene families : OG0000982 (Archaeplastida) Phylogenetic Tree(s): OG0000982_tree ,
OG_05_0000891 (LandPlants) Phylogenetic Tree(s): OG_05_0000891_tree ,
OG_06_0000914 (SeedPlants) Phylogenetic Tree(s): OG_06_0000914_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00168p00058210
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT3G46060 ATRABE1C,... RAB GTPase homolog 8A 0.02 Archaeplastida
Cre15.g641800 No alias GTP-binding protein yptV2 OS=Volvox carteri 0.03 Archaeplastida
LOC_Os03g60530.1 No alias E-class RAB GTPase 0.03 Archaeplastida
LOC_Os07g13530.1 No alias E-class RAB GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 9 162
No external refs found!