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  5. AMTR_s00168p00074090

AMTR_s00168p00074090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00168.31

No description available


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0020549 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019768 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00168p00074090
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.02 Archaeplastida
AT5G39310 EXPA24, ATEXP24,... expansin A24 0.02 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Gb_01958 No alias alpha-class expansin 0.02 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.02 Archaeplastida
Gb_09118 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g51040.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g60720.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.04 Archaeplastida
MA_184474g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_274624g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09650.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c22_760V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.02 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo78615 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115270.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc03g115320.3.1 No alias alpha-class expansin 0.01 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc09g018020.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e011741_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!