AMTR_s00170p00016030 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00170.4

No description available


Gene families : OG0004476 (Archaeplastida) Phylogenetic Tree(s): OG0004476_tree ,
OG_05_0003078 (LandPlants) Phylogenetic Tree(s): OG_05_0003078_tree ,
OG_06_0010509 (SeedPlants) Phylogenetic Tree(s): OG_06_0010509_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00170p00016030
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
Solyc09g025260.4.1 No alias Rho-N domain-containing protein 1, chloroplastic... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006353 DNA-templated transcription, termination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011112 Rho_N 199 230
No external refs found!