1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00171p00029360

AMTR_s00171p00029360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00171.6

No description available


Gene families : OG0006390 (Archaeplastida) Phylogenetic Tree(s): OG0006390_tree ,
OG_05_0004686 (LandPlants) Phylogenetic Tree(s): OG_05_0004686_tree ,
OG_06_0004054 (SeedPlants) Phylogenetic Tree(s): OG_06_0004054_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00171p00029360
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Gb_35558 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g02530.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_65418g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g00160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g053950.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc10g008320.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029849_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!