AMTR_s00175p00055150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00175.26

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF5 GTPase activating factor


Gene families : OG0002044 (Archaeplastida) Phylogenetic Tree(s): OG0002044_tree ,
OG_05_0002006 (LandPlants) Phylogenetic Tree(s): OG_05_0002006_tree ,
OG_06_0002551 (SeedPlants) Phylogenetic Tree(s): OG_06_0002551_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00175p00055150
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Zm00001e012675_P001 No alias eIF2-GTP hydrolysis activating factor (eIF5) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002735 Transl_init_fac_IF2/IF5 4 129
IPR003307 W2_domain 397 477
No external refs found!