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  5. AMTR_s00177p00048180

AMTR_s00177p00048180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00177.25

Description : Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana


Gene families : OG0045923 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0045606 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0040188 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00177p00048180
Cluster HCCA: Cluster_190


Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 751 811
IPR019474 Ub_conjug_fac_E4_core 75 735
No external refs found!