AMTR_s00178p00018030 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00178.1

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0004454 (LandPlants) Phylogenetic Tree(s): OG_05_0004454_tree ,
OG_06_0002864 (SeedPlants) Phylogenetic Tree(s): OG_06_0002864_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00178p00018030
Cluster	HCCA: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00034p00045070	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.06	Archaeplastida
AMTR_s00069p00182480	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.07	Archaeplastida
AT1G01120	KCS1	3-ketoacyl-CoA synthase 1	0.03	Archaeplastida
AT1G04220	KCS2	3-ketoacyl-CoA synthase 2	0.07	Archaeplastida
AT1G07720	KCS3	3-ketoacyl-CoA synthase 3	0.05	Archaeplastida
AT1G25450	KCS5, CER60	3-ketoacyl-CoA synthase 5	0.03	Archaeplastida
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.05	Archaeplastida
AT1G71160	KCS7	3-ketoacyl-CoA synthase 7	0.02	Archaeplastida
AT2G26250	KCS10, FDH	3-ketoacyl-CoA synthase 10	0.06	Archaeplastida
AT2G46720	HIC, KCS13	3-ketoacyl-CoA synthase 13	0.03	Archaeplastida
AT3G52160	KCS15	3-ketoacyl-CoA synthase 15	0.02	Archaeplastida
AT5G04530	KCS19	3-ketoacyl-CoA synthase 19	0.03	Archaeplastida
AT5G43760	KCS20	3-ketoacyl-CoA synthase 20	0.09	Archaeplastida
AT5G49070	KCS21	3-ketoacyl-CoA synthase 21	0.03	Archaeplastida
GSVIVT01005975001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
GSVIVT01013708001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
GSVIVT01018539001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.07	Archaeplastida
GSVIVT01022919001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
GSVIVT01026270001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
GSVIVT01034244001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
GSVIVT01035504001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
Gb_05331	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Gb_15233	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Gb_15941	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_17018	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_27864	No alias	3-ketoacyl-CoA synthase (KCS)	0.07	Archaeplastida
Gb_32625	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os02g49920.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g06705.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os03g08360.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g26530.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os03g26620.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os06g14810.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
LOC_Os06g15170.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os09g19650.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
LOC_Os10g28060.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os10g33370.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
MA_10426663g0020	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_10429708g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
MA_105806g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_10605g0020	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_339700g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_415118g0020	No alias	3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_43136g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_759169g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Mp1g06080.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Pp3c3_31430V3.1	No alias	3-ketoacyl-CoA synthase 4	0.03	Archaeplastida
Pp3c8_1690V3.1	No alias	3-ketoacyl-CoA synthase 11	0.06	Archaeplastida
Smo79947	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.06	Archaeplastida
Smo91671	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Solyc02g063140.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Solyc02g085870.3.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Solyc03g005320.3.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Solyc05g009270.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Solyc06g053870.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.07	Archaeplastida
Solyc08g067260.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Solyc09g083050.3.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Solyc11g072990.1.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Zm00001e000476_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.07	Archaeplastida
Zm00001e000593_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.1	Archaeplastida
Zm00001e001021_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e001847_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Zm00001e002667_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e004603_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.1	Archaeplastida
Zm00001e004773_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.14	Archaeplastida
Zm00001e012803_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.11	Archaeplastida
Zm00001e016197_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e021255_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e023474_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e033922_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.08	Archaeplastida
Zm00001e034732_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Zm00001e038586_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Neighborhood
BP	GO:0006006	glucose metabolic process	IEP	Neighborhood
BP	GO:0006094	gluconeogenesis	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019319	hexose biosynthetic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	36	317
IPR013747	ACP_syn_III_C	336	417

External Links

No external refs found!

AMTR_s00178p00018030 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation