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  5. AMTR_s00178p00038720

AMTR_s00178p00038720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00178.7

Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana


Gene families : OG0001036 (Archaeplastida) Phylogenetic Tree(s): OG0001036_tree ,
OG_05_0000624 (LandPlants) Phylogenetic Tree(s): OG_05_0000624_tree ,
OG_06_0000863 (SeedPlants) Phylogenetic Tree(s): OG_06_0000863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00178p00038720
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0051766 inositol trisphosphate kinase activity IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010369 DUF966 21 374
No external refs found!