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  5. AMTR_s00178p00058280

AMTR_s00178p00058280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00178.11

Description : Protein ALP1-like OS=Arabidopsis thaliana


Gene families : OG0000504 (Archaeplastida) Phylogenetic Tree(s): OG0000504_tree ,
OG_05_0000309 (LandPlants) Phylogenetic Tree(s): OG_05_0000309_tree ,
OG_06_0000272 (SeedPlants) Phylogenetic Tree(s): OG_06_0000272_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00178p00058280
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Mp6g13590.1 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!