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  5. AMTR_s00182p00020350

AMTR_s00182p00020350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00182.7

Description : Solute transport.primary active transport.V-type ATPase complex.membrane V0 subcomplex.subunit c


Gene families : OG0001007 (Archaeplastida) Phylogenetic Tree(s): OG0001007_tree ,
OG_05_0001170 (LandPlants) Phylogenetic Tree(s): OG_05_0001170_tree ,
OG_06_0001436 (SeedPlants) Phylogenetic Tree(s): OG_06_0001436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00182p00020350
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT4G38920 VHA-C3, AVA-P3, ATVHA-C3 vacuolar-type H(+)-ATPase C3 0.03 Archaeplastida
Cre06.g257450 No alias Solute transport.primary active transport.V-type ATPase... 0.02 Archaeplastida
LOC_Os02g34510.1 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.05 Archaeplastida
LOC_Os11g06890.1 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.05 Archaeplastida
LOC_Os12g07140.1 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.05 Archaeplastida
MA_10427091g0010 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.05 Archaeplastida
Pp3c2_36900V3.1 No alias ATPase, F0/V0 complex, subunit C protein 0.04 Archaeplastida
Solyc02g084360.3.1 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.03 Archaeplastida
Solyc04g081090.3.1 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.03 Archaeplastida
Zm00001e009048_P001 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.05 Archaeplastida
Zm00001e024502_P002 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.03 Archaeplastida
Zm00001e029675_P001 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.05 Archaeplastida
Zm00001e039470_P001 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity IEA Interproscan
BP GO:0015991 ATP hydrolysis coupled proton transport IEA Interproscan
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002379 ATPase_proteolipid_c-like_dom 92 156
IPR002379 ATPase_proteolipid_c-like_dom 13 77
No external refs found!