Aliases : evm_27.TU.AmTr_v1.0_scaffold00184.23
Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0003886 (LandPlants) Phylogenetic Tree(s): OG_05_0003886_tree ,
OG_06_0002813 (SeedPlants) Phylogenetic Tree(s): OG_06_0002813_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00184p00048850 | |
Cluster | HCCA: Cluster_33 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00085090 | evm_27.TU.AmTr_v1... | Transcription factor SCREAM2 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
AT3G26744 | ATICE1, ICE1, SCRM | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
LOC_Os01g70310.2 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.02 | Archaeplastida | |
LOC_Os03g04310.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
MA_448849g0010 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.04 | Archaeplastida | |
Mp4g04920.1 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.04 | Archaeplastida | |
Pp3c13_6760V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
Pp3c2_16410V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
Pp3c3_15850V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
Solyc06g051550.4.1 | No alias | transcription factor (bHLH). iron uptake transcription factor FIT | 0.03 | Archaeplastida | |
Solyc12g088130.3.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
Zm00001e021526_P001 | No alias | transcription factor (bHLH). transcription factor (ICE1|2) | 0.02 | Archaeplastida | |
Zm00001e030156_P003 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Zm00001e040675_P003 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
Zm00001e040732_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
BP | GO:0000910 | cytokinesis | IEP | Neighborhood |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0004620 | phospholipase activity | IEP | Neighborhood |
MF | GO:0004629 | phospholipase C activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006820 | anion transport | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
MF | GO:0016298 | lipase activity | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
BP | GO:0019321 | pentose metabolic process | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0019566 | arabinose metabolic process | IEP | Neighborhood |
BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0046373 | L-arabinose metabolic process | IEP | Neighborhood |
MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011598 | bHLH_dom | 128 | 171 |
No external refs found! |