AMTR_s00190p00027950 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00190.9

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00190p00027950
Cluster	HCCA: Cluster_169

Target	Alias	Description	ECC score	Gene Family Method
AT1G10920	LOV1	NB-ARC domain-containing disease resistance protein	0.04	Archaeplastida
AT1G50180	No alias	NB-ARC domain-containing disease resistance protein	0.03	Archaeplastida
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Archaeplastida
AT1G59620	CW9	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
AT1G59780	No alias	NB-ARC domain-containing disease resistance protein	0.04	Archaeplastida
AT3G07040	RPM1, RPS3	NB-ARC domain-containing disease resistance protein	0.04	Archaeplastida
AT3G46530	RPP13	NB-ARC domain-containing disease resistance protein	0.03	Archaeplastida
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.03	Archaeplastida
AT5G35450	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
Solyc04g009690.2.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001505	regulation of neurotransmitter levels	IEP	Neighborhood
MF	GO:0003951	NAD+ kinase activity	IEP	Neighborhood
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	Neighborhood
MF	GO:0004806	triglyceride lipase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006544	glycine metabolic process	IEP	Neighborhood
BP	GO:0006563	L-serine metabolic process	IEP	Neighborhood
BP	GO:0006739	NADP metabolic process	IEP	Neighborhood
BP	GO:0006741	NADP biosynthetic process	IEP	Neighborhood
BP	GO:0009069	serine family amino acid metabolic process	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0042133	neurotransmitter metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	151	439
IPR025875	Leu-rich_rpt_4	578	622

External Links

No external refs found!