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  5. AMTR_s00198p00016850

AMTR_s00198p00016850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00198.3

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0001565 (Archaeplastida) Phylogenetic Tree(s): OG0001565_tree ,
OG_05_0001513 (LandPlants) Phylogenetic Tree(s): OG_05_0001513_tree ,
OG_06_0001569 (SeedPlants) Phylogenetic Tree(s): OG_06_0001569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00198p00016850
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000227001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
MA_10431549g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e033486_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 35 68
No external refs found!