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AT1G05990 (RHS1)


Aliases : RHS1

Description : EF hand calcium-binding protein family


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0001071 (SeedPlants) Phylogenetic Tree(s): OG_06_0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G05990
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT3G29000 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT4G14640 AtCML8, CAM8 calmodulin 8 0.05 Archaeplastida
AT4G37010 CEN2 centrin 2 0.04 Archaeplastida
AT5G44460 CML43 calmodulin like 43 0.05 Archaeplastida
Cre03.g150300 No alias Calmodulin-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre11.g468450 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
LOC_Os03g20370.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
Mp6g06060.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c3_34260V3.1 No alias centrin2 0.02 Archaeplastida
Zm00001e007722_P001 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015171 amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 77 143
IPR002048 EF_hand_dom 5 67
No external refs found!