1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00204p00023040

AMTR_s00204p00023040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00204.5

No description available


Gene families : OG0000015 (Archaeplastida) Phylogenetic Tree(s): OG0000015_tree ,
OG_05_0000013 (LandPlants) Phylogenetic Tree(s): OG_05_0000013_tree ,
OG_06_0002248 (SeedPlants) Phylogenetic Tree(s): OG_06_0002248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00204p00023040

Target Alias Description ECC score Gene Family Method Actions
AT1G72430 No alias SAUR-like auxin-responsive protein family 0.06 Archaeplastida
AT2G18010 No alias SAUR-like auxin-responsive protein family 0.05 Archaeplastida
AT3G03840 No alias SAUR-like auxin-responsive protein family 0.05 Archaeplastida
AT3G12955 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT4G13790 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT4G31320 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
AT4G38825 No alias SAUR-like auxin-responsive protein family 0.04 Archaeplastida
AT5G18010 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
GSVIVT01015023001 No alias No description available 0.03 Archaeplastida
GSVIVT01016698001 No alias No description available 0.04 Archaeplastida
GSVIVT01019094001 No alias Auxin-induced protein 10A5 OS=Glycine max 0.05 Archaeplastida
GSVIVT01019106001 No alias Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024129001 No alias Auxin-induced protein X15 OS=Glycine max 0.04 Archaeplastida
LOC_Os01g70050.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g05060.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g24700.1 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g24740.1 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g56680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g48850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g48860.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g02520.1 No alias Auxin-induced protein X15 OS=Glycine max... 0.02 Archaeplastida
LOC_Os08g35110.1 No alias no description available(sp|q29pu2|sau76_arath : 85.5) 0.02 Archaeplastida
LOC_Os12g41600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10428249g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10901g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_124243g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_15103g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_16043g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_16245g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_18725g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_188586g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_245557g0010 No alias no description available(sp|q29pu2|sau76_arath : 81.6) 0.03 Archaeplastida
MA_26797g0010 No alias no description available(sp|q9sl45|sau10_arath : 85.9) 0.05 Archaeplastida
MA_536667g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_62903g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6336770g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_667011g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_75109g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8351565g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_85990g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g16840.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp6g05100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c13_3260V3.1 No alias SAUR-like auxin-responsive protein family 0.05 Archaeplastida
Pp3c13_3290V3.1 No alias SAUR-like auxin-responsive protein family 0.06 Archaeplastida
Pp3c5_24610V3.1 No alias SAUR-like auxin-responsive protein family 0.05 Archaeplastida
Smo440501 No alias No description available 0.04 Archaeplastida
Solyc01g091030.3.1 No alias Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g110555.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc03g082530.1.1 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g042470.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g054760.1.1 No alias Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g009280.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g009290.1.1 No alias no description available(sp|q29pu2|sau76_arath : 103.0) 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 11 113
No external refs found!