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  5. AMTR_s00235p00022890

AMTR_s00235p00022890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00235.9

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL2-N-terminal component


Gene families : OG0008389 (Archaeplastida) Phylogenetic Tree(s): OG0008389_tree ,
OG_05_0005591 (LandPlants) Phylogenetic Tree(s): OG_05_0005591_tree ,
OG_06_0003601 (SeedPlants) Phylogenetic Tree(s): OG_06_0003601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00235p00022890
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00235p00022820 evm_27.TU.AmTr_v1... 60S ribosomal protein L2, mitochondrial OS=Oryza sativa... 0.04 Archaeplastida
AT2G07715 No alias Nucleic acid-binding, OB-fold-like protein 0.04 Archaeplastida
ATMG00560 RPL2 Nucleic acid-binding, OB-fold-like protein 0.05 Archaeplastida
Solyc00g500103.1.1 No alias component mtRPL2-N-terminal of large ribosomal subunit proteome 0.03 Archaeplastida
Solyc00g500228.1.1 No alias component mtRPL2-N-terminal of large ribosomal subunit proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
BP GO:0042773 ATP synthesis coupled electron transport IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 50 92
No external refs found!