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  5. AMTR_s00248p00017710

AMTR_s00248p00017710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00248.4

Description : Cullin-1 OS=Arabidopsis thaliana


Gene families : OG0001282 (Archaeplastida) Phylogenetic Tree(s): OG0001282_tree ,
OG_05_0011438 (LandPlants) Phylogenetic Tree(s): OG_05_0011438_tree ,
OG_06_0011544 (SeedPlants) Phylogenetic Tree(s): OG_06_0011544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00248p00017710
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
MA_83109g0010 No alias Cullin-1 OS=Arabidopsis thaliana (sp|q94ah6|cul1_arath : 306.0) 0.02 Archaeplastida
Solyc09g074680.3.1 No alias scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0031461 cullin-RING ubiquitin ligase complex IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR001373 Cullin_N 5 119
No external refs found!