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  5. AMTR_s00268p00010890

AMTR_s00268p00010890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00268.7

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TRA1 component


Gene families : OG0001726 (Archaeplastida) Phylogenetic Tree(s): OG0001726_tree ,
OG_05_0002263 (LandPlants) Phylogenetic Tree(s): OG_05_0002263_tree ,
OG_06_0001755 (SeedPlants) Phylogenetic Tree(s): OG_06_0001755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00268p00010890
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT2G17930 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.07 Archaeplastida
AT4G36080 No alias phosphotransferases, alcohol group as... 0.07 Archaeplastida
Cpa|evm.model.tig00021537.68 No alias No description available 0.01 Archaeplastida
GSVIVT01018783001 No alias Protein modification.phosphorylation.atypical kinase... 0.06 Archaeplastida
LOC_Os07g45070.1 No alias component TRA1 of SAGA transcription co-activator complex 0.05 Archaeplastida
LOC_Os07g45074.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_100706g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10427352g0010 No alias component TRA1 of SAGA transcription co-activator complex 0.09 Archaeplastida
MA_10427352g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10432279g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp5g23620.1 No alias component TRA1 of SAGA transcription co-activator... 0.03 Archaeplastida
Solyc02g083900.3.1 No alias component TRA1 of SAGA transcription co-activator... 0.03 Archaeplastida
Zm00001e035713_P005 No alias component TRA1 of SAGA transcription co-activator... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!