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  5. AMTR_s00278p00010750

AMTR_s00278p00010750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00278.1

No description available


Gene families : OG0000139 (Archaeplastida) Phylogenetic Tree(s): OG0000139_tree ,
OG_05_0000052 (LandPlants) Phylogenetic Tree(s): OG_05_0000052_tree ,
OG_06_0000062 (SeedPlants) Phylogenetic Tree(s): OG_06_0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00278p00010750
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00168910 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.05 Archaeplastida
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.04 Archaeplastida
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.02 Archaeplastida
AT3G50120 No alias Plant protein of unknown function (DUF247) 0.04 Archaeplastida
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.02 Archaeplastida
AT3G50190 No alias Plant protein of unknown function (DUF247) 0.06 Archaeplastida
AT4G31980 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.03 Archaeplastida
GSVIVT01026858001 No alias No description available 0.03 Archaeplastida
GSVIVT01033580001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os01g21670.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g30520.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os11g34090.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g078830.1.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g016020.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc09g009230.2.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc10g079520.1.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g079530.2.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e024232_P001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 1 62
No external refs found!