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  5. AMTR_s00316p00011560

AMTR_s00316p00011560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00316.1

Description : Probable calcium-binding protein CML43 OS=Arabidopsis thaliana


Gene families : OG0009770 (Archaeplastida) Phylogenetic Tree(s): OG0009770_tree ,
OG_05_0009484 (LandPlants) Phylogenetic Tree(s): OG_05_0009484_tree ,
OG_06_0008058 (SeedPlants) Phylogenetic Tree(s): OG_06_0008058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00316p00011560
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00121p00130840 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00263p00018740 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML43 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s02547p00008880 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML43 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc04g058160.2.1 No alias Probable calcium-binding protein CML44 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 86 148
No external refs found!