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  5. AMTR_s00316p00012460

AMTR_s00316p00012460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00316.2

Description : Calcium-binding protein CML42 OS=Arabidopsis thaliana


Gene families : OG0009770 (Archaeplastida) Phylogenetic Tree(s): OG0009770_tree ,
OG_05_0009484 (LandPlants) Phylogenetic Tree(s): OG_05_0009484_tree ,
OG_06_0008058 (SeedPlants) Phylogenetic Tree(s): OG_06_0008058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00316p00012460
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT1G21550 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 86 147
No external refs found!