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  5. AMTR_s00319p00013650

AMTR_s00319p00013650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00319.2

Description : Polygalacturonase QRT3 OS=Arabidopsis thaliana


Gene families : OG0003590 (Archaeplastida) Phylogenetic Tree(s): OG0003590_tree ,
OG_05_0002501 (LandPlants) Phylogenetic Tree(s): OG_05_0002501_tree ,
OG_06_0001950 (SeedPlants) Phylogenetic Tree(s): OG_06_0001950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00319p00013650
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT4G20050 QRT3 Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01012139001 No alias Cell wall.pectin.modification and... 0.05 Archaeplastida
MA_10425986g0020 No alias polygalacturonase (QRT3) 0.03 Archaeplastida
MA_917578g0010 No alias polygalacturonase (QRT3) 0.03 Archaeplastida
Zm00001e006958_P005 No alias polygalacturonase (QRT3) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!