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  5. AMTR_s00328p00009820

AMTR_s00328p00009820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00328.2

No description available


Gene families : OG0000651 (Archaeplastida) Phylogenetic Tree(s): OG0000651_tree ,
OG_05_0010188 (LandPlants) Phylogenetic Tree(s): OG_05_0010188_tree ,
OG_06_0009124 (SeedPlants) Phylogenetic Tree(s): OG_06_0009124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00328p00009820
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AT2G26050 No alias Protein of unknown function (DUF1644) 0.03 Archaeplastida
AT3G25910 No alias Protein of unknown function (DUF1644) 0.03 Archaeplastida
LOC_Os04g37530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g23790.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g061750.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020682_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e033367_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006672 ceramide metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR012866 DUF1644 24 180
No external refs found!