AMTR_s00334p00013200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00334.4

Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo dimer.large subunit


Gene families : OG0001030 (Archaeplastida) Phylogenetic Tree(s): OG0001030_tree ,
OG_05_0000707 (LandPlants) Phylogenetic Tree(s): OG_05_0000707_tree ,
OG_06_0000483 (SeedPlants) Phylogenetic Tree(s): OG_06_0000483_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00334p00013200
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Gb_07644 No alias Ribulose bisphosphate carboxylase large chain... 0.02 Archaeplastida
Gb_15502 No alias Ribulose bisphosphate carboxylase large chain... 0.02 Archaeplastida
Gb_37464 No alias Ribulose bisphosphate carboxylase large chain... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
BP GO:0042773 ATP synthesis coupled electron transport IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000685 RuBisCO_lsu_C 154 462
No external refs found!