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  5. AMTR_s00340p00012500

AMTR_s00340p00012500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00340.2

Description : COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana


Gene families : OG0006318 (Archaeplastida) Phylogenetic Tree(s): OG0006318_tree ,
OG_05_0007106 (LandPlants) Phylogenetic Tree(s): OG_05_0007106_tree ,
OG_06_0007203 (SeedPlants) Phylogenetic Tree(s): OG_06_0007203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00340p00012500
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Solyc11g005550.2.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004371 glycerone kinase activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 186 210
IPR001680 WD40_repeat 53 88
IPR001680 WD40_repeat 263 298
IPR001680 WD40_repeat 216 256
IPR001680 WD40_repeat 93 130
IPR001680 WD40_repeat 12 46
No external refs found!