- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00370.1
Description : 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum
Gene families : OG0006469 (Archaeplastida) Phylogenetic Tree(s): OG0006469_tree ,
OG_05_0002312 (LandPlants) Phylogenetic Tree(s): OG_05_0002312_tree ,
OG_06_0003941 (SeedPlants) Phylogenetic Tree(s): OG_06_0003941_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00370p00007710 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00251p00014110 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.03 | Archaeplastida | |
| AT2G07725 | No alias | Ribosomal L5P family protein | 0.05 | Archaeplastida | |
| ATMG00210 | RPL5 | ribosomal protein L5 | 0.05 | Archaeplastida | |
| LOC_Os09g08890.1 | No alias | component mtRPL5 of large ribosomal subunit proteome | 0.02 | Archaeplastida | |
| Mp2g12110.1 | No alias | component mtRPL5 of large ribosomal subunit proteome | 0.02 | Archaeplastida | |
| Solyc01g049950.1.1 | No alias | 60S ribosomal protein L5, mitochondrial OS=Solanum... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Neighborhood |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
| BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Neighborhood |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
| BP | GO:0046034 | ATP metabolic process | IEP | Neighborhood |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Neighborhood |
| MF | GO:0048038 | quinone binding | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| MF | GO:0051287 | NAD binding | IEP | Neighborhood |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
| BP | GO:1902600 | proton transmembrane transport | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |