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  5. AMTR_s00393p00013250

AMTR_s00393p00013250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00393.1

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00393p00013250
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_01998 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os01g47780.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os04g39590.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os05g48890.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os08g39270.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc07g053540.1.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e010053_P001 No alias fasciclin-type arabinogalactan protein 0.01 Archaeplastida
Zm00001e020209_P002 No alias fasciclin-type arabinogalactan protein 0.01 Archaeplastida
Zm00001e024743_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000782 FAS1_domain 38 174
No external refs found!