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  5. AMTR_s00449p00011300

AMTR_s00449p00011300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00449.1

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.GDP-L-fucose synthesis.de novo biosynthesis.GDP-D-mannose 4,6-dehydratase


Gene families : OG0004593 (Archaeplastida) Phylogenetic Tree(s): OG0004593_tree ,
OG_05_0003972 (LandPlants) Phylogenetic Tree(s): OG_05_0003972_tree ,
OG_06_0006217 (SeedPlants) Phylogenetic Tree(s): OG_06_0006217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00449p00011300
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Mp1g09600.1 No alias GDP-D-mannose 4,6-dehydratase (MUR1) 0.02 Archaeplastida
Mp2g21830.1 No alias GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0044237 cellular metabolic process IEA Interproscan
MF GO:0050662 coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
MF GO:0008831 dTDP-4-dehydrorhamnose reductase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045226 extracellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0046379 extracellular polysaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 17 266
No external refs found!