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  5. AMTR_s00566p00010050

AMTR_s00566p00010050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00566.1

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0001040 (LandPlants) Phylogenetic Tree(s): OG_05_0001040_tree ,
OG_06_0001095 (SeedPlants) Phylogenetic Tree(s): OG_06_0001095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00566p00010050

Target Alias Description ECC score Gene Family Method Actions
AT2G23800 GGPS2, GGPS5 geranylgeranyl pyrophosphate synthase 2 0.02 Archaeplastida
LOC_Os07g39270.1 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_10429253g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_10429756g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 106 344
No external refs found!