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Aliases : evm_27.TU.AmTr_v1.0_scaffold00821.1
Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component
Gene families : OG0004005 (Archaeplastida) Phylogenetic Tree(s): OG0004005_tree ,
OG_05_0004662 (LandPlants) Phylogenetic Tree(s): OG_05_0004662_tree ,
OG_06_0005244 (SeedPlants) Phylogenetic Tree(s): OG_06_0005244_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00821p00008410 | |
| Cluster | HCCA: Cluster_241 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G29150 | ATS9, RPN6 | non-ATPase subunit 9 | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
| CC | GO:0005853 | eukaryotic translation elongation factor 1 complex | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| MF | GO:0008430 | selenium binding | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Neighborhood |
| MF | GO:0042277 | peptide binding | IEP | Neighborhood |
| BP | GO:0045185 | maintenance of protein location | IEP | Neighborhood |
| MF | GO:0046923 | ER retention sequence binding | IEP | Neighborhood |
| BP | GO:0051235 | maintenance of location | IEP | Neighborhood |
| BP | GO:0051651 | maintenance of location in cell | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000717 | PCI_dom | 289 | 390 |
| No external refs found! |