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  5. AMTR_s01267p00006490

AMTR_s01267p00006490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01267.1

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01267p00006490
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00009p00257990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00012p00208260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G08810 MYB60, AtMYB60 myb domain protein 60 0.02 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.03 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.04 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.03 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.02 Archaeplastida
AT1G74080 ATMYB122, MYB122 myb domain protein 122 0.02 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.03 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.05 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G24310 MYB305, ATMYB71 myb domain protein 305 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.03 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.02 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.03 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.03 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.03 Archaeplastida
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.01 Archaeplastida
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.03 Archaeplastida
AT5G16600 MYB43, AtMYB43 myb domain protein 43 0.03 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.03 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.03 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019945001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024036001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032452001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01032467001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_02423 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_20309 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22885 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_26833 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_29520 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34086 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g74410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g42950.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g10350.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10427849g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_130918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_14204g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_22140g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246817g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9476g0040 No alias Transcription factor MYB3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_95534g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_97537g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c9_24170V3.1 No alias myb domain protein 33 0.02 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g069850.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g044680.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e023478_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041547_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 10 57
IPR001005 SANT/Myb 64 108
No external refs found!