1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s01360p00009540

AMTR_s01360p00009540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01360.1

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0000021 (SeedPlants) Phylogenetic Tree(s): OG_06_0000021_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01360p00009540
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00084p00087230 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.08 Archaeplastida
Gb_00751 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_03682 No alias transcription factor (mTERF) 0.02 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 Archaeplastida
Gb_12989 No alias transcription factor (mTERF) 0.02 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.07 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.02 Archaeplastida
Gb_26213 No alias transcription factor (mTERF) 0.05 Archaeplastida
Gb_31439 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os05g33460.2 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12110.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_10209606g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_10430524g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_31885g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_929479g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc02g082010.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g011700.2.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072550.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 34 238
IPR003690 MTERF 199 306
No external refs found!