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  5. AMTR_s01571p00001870

AMTR_s01571p00001870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01571.1

Description : Probable calcium-binding protein CML43 OS=Arabidopsis thaliana


Gene families : OG0009770 (Archaeplastida) Phylogenetic Tree(s): OG0009770_tree ,
OG_05_0009484 (LandPlants) Phylogenetic Tree(s): OG_05_0009484_tree ,
OG_06_0008058 (SeedPlants) Phylogenetic Tree(s): OG_06_0008058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01571p00001870
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00239p00012930 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Solyc04g058160.2.1 No alias Probable calcium-binding protein CML44 OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g058170.1.1 No alias Probable calcium-binding protein CML44 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 67 129
No external refs found!