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  4. Sequence
  5. AMTR_s01773p00009760

AMTR_s01773p00009760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01773.1

No description available


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01773p00009760
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01001181001 No alias No description available 0.03 Archaeplastida
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01018010001 No alias No description available 0.03 Archaeplastida
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_02446 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02458 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_06123 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_06428 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_08579 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_11754 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os07g07790.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g07860.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g07920.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_113140g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
MA_383975g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g16210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g21600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c11_11470V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
Pp3c19_17730V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 Archaeplastida
Pp3c1_31020V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.02 Archaeplastida
Solyc06g054060.1.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g065410.4.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Solyc09g082280.3.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Solyc11g072030.3.1 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e005336_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e011462_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e011883_P002 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!