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  5. AMTR_s01901p00003250

AMTR_s01901p00003250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01901.1

Description : Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana


Gene families : OG0001877 (Archaeplastida) Phylogenetic Tree(s): OG0001877_tree ,
OG_05_0001270 (LandPlants) Phylogenetic Tree(s): OG_05_0001270_tree ,
OG_06_0000758 (SeedPlants) Phylogenetic Tree(s): OG_06_0000758_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01901p00003250
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012457001 No alias Mediator of RNA polymerase II transcription subunit 15a... 0.02 Archaeplastida
GSVIVT01012964001 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!