AMTR_s02838p00004170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold02838.1

No description available


Gene families : OG0000576 (Archaeplastida) Phylogenetic Tree(s): OG0000576_tree ,
OG_05_0000301 (LandPlants) Phylogenetic Tree(s): OG_05_0000301_tree ,
OG_06_0000134 (SeedPlants) Phylogenetic Tree(s): OG_06_0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s02838p00004170
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00493p00011600 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.04 Archaeplastida
GSVIVT01026928001 No alias Gibberellin 20-oxidase-like protein OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_26940 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 Archaeplastida
Gb_26942 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 Archaeplastida
Gb_26943 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.03 Archaeplastida
Gb_27025 No alias Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_30273 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.02 Archaeplastida
Gb_33056 No alias Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_41080 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 Archaeplastida
Gb_41081 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 Archaeplastida
MA_316459g0010 No alias Gibberellin 20-oxidase-like protein OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g042980.2.1 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!