AMTR_s03052p00000290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold03052.1

Description : ABC transporter G family member 11 OS=Arabidopsis thaliana


Gene families : OG0010528 (Archaeplastida) Phylogenetic Tree(s): OG0010528_tree ,
OG_05_0000734 (LandPlants) Phylogenetic Tree(s): OG_05_0000734_tree ,
OG_06_0000499 (SeedPlants) Phylogenetic Tree(s): OG_06_0000499_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s03052p00000290
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00012240 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s01072p00000950 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s01529p00010210 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s02052p00000390 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01002663001 No alias ABC transporter G family member 11 OS=Arabidopsis thaliana 0.06 Archaeplastida
MA_10436774g0020 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 31 243
No external refs found!