AMTR_s04408p00000200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold04408.1

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor


Gene families : OG0000167 (Archaeplastida) Phylogenetic Tree(s): OG0000167_tree ,
OG_05_0001238 (LandPlants) Phylogenetic Tree(s): OG_05_0001238_tree ,
OG_06_0001726 (SeedPlants) Phylogenetic Tree(s): OG_06_0001726_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s04408p00000200
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G06070 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 Archaeplastida
AT1G58110 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.05 Archaeplastida
AT2G31370 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.03 Archaeplastida
GSVIVT01001783001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.04 Archaeplastida
GSVIVT01010836001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.03 Archaeplastida
GSVIVT01020658001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.03 Archaeplastida
Gb_07087 No alias transcription factor (bZIP) 0.04 Archaeplastida
LOC_Os01g11350.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
LOC_Os04g41820.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
LOC_Os09g34060.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
LOC_Os12g06520.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
Solyc01g103873.1.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
Solyc01g110480.4.1 No alias transcription factor (bZIP) 0.02 Archaeplastida
Solyc11g020950.3.1 No alias transcription factor (bZIP) 0.05 Archaeplastida
Zm00001e007706_P001 No alias transcription factor (bZIP) 0.04 Archaeplastida
Zm00001e010978_P001 No alias transcription factor (bZIP) 0.05 Archaeplastida
Zm00001e021397_P001 No alias transcription factor (bZIP) 0.05 Archaeplastida
Zm00001e029390_P004 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038237_P001 No alias transcription factor (bZIP) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004827 bZIP 236 269
No external refs found!