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  5. AMTR_s04574p00001800

AMTR_s04574p00001800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold04574.2

No description available


Gene families : OG0003080 (Archaeplastida) Phylogenetic Tree(s): OG0003080_tree ,
OG_05_0002809 (LandPlants) Phylogenetic Tree(s): OG_05_0002809_tree ,
OG_06_0002722 (SeedPlants) Phylogenetic Tree(s): OG_06_0002722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s04574p00001800
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
ATMG00160 COX2 cytochrome oxidase 2 0.07 Archaeplastida
ATMG01280 ORF291 Cytochrome C oxidase subunit II-like, transmembrane domain 0.07 Archaeplastida
Gb_08948 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.05 Archaeplastida
Gb_17977 No alias Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_34804 No alias Cytochrome c oxidase subunit 2 OS=Glycine max... 0.03 Archaeplastida
MA_10435550g0020 No alias Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10436044g0020 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 Archaeplastida
Mp4g18480.1 No alias Cytochrome c oxidase subunit 2 OS=Marchantia polymorpha... 0.02 Archaeplastida
Solyc00g500101.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.04 Archaeplastida
Solyc00g500118.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.04 Archaeplastida
Solyc00g500244.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.04 Archaeplastida
Solyc00g500275.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.04 Archaeplastida
Solyc00g500359.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.04 Archaeplastida
Solyc09g015880.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0022900 electron transport chain IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042773 ATP synthesis coupled electron transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR011759 Cyt_c_oxidase_su2_TM_dom 66 111
No external refs found!