AMTR_s04606p00004600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold04606.1

Description : Polygalacturonase OS=Prunus persica


Gene families : OG0011525 (Archaeplastida) Phylogenetic Tree(s): OG0011525_tree ,
OG_05_0012091 (LandPlants) Phylogenetic Tree(s): OG_05_0012091_tree ,
OG_06_0006270 (SeedPlants) Phylogenetic Tree(s): OG_06_0006270_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s04606p00004600
Cluster HCCA: Cluster_13


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005542 folic acid binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008517 folic acid transmembrane transporter activity IEP Neighborhood
MF GO:0008518 folate:anion antiporter activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0090482 vitamin transmembrane transporter activity IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 55 138
No external refs found!