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  5. AMTR_s04787p00001380

AMTR_s04787p00001380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold04787.1

Description : Dirigent protein 21 OS=Arabidopsis thaliana


Gene families : OG0000064 (Archaeplastida) Phylogenetic Tree(s): OG0000064_tree ,
OG_05_0000024 (LandPlants) Phylogenetic Tree(s): OG_05_0000024_tree ,
OG_06_0000028 (SeedPlants) Phylogenetic Tree(s): OG_06_0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s04787p00001380
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00176950 evm_27.TU.AmTr_v1... Dirigent protein 11 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00041p00177760 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00041p00182080 evm_27.TU.AmTr_v1... Dirigent protein 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00041p00182790 evm_27.TU.AmTr_v1... Dirigent protein 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00041p00182920 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s01423p00004480 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_01814 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_24573 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_35611 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g01600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g01660.1 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g42520.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g07680.1 No alias Dirigent protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g10870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_111821g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_293305g0010 No alias Dirigent protein 11 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g055190.1.1 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR004265 Dirigent 38 180
No external refs found!