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  5. AMTR_s05043p00002670

AMTR_s05043p00002670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold05043.1

No description available


Gene families : OG0000382 (Archaeplastida) Phylogenetic Tree(s): OG0000382_tree ,
OG_05_0000235 (LandPlants) Phylogenetic Tree(s): OG_05_0000235_tree ,
OG_06_0000343 (SeedPlants) Phylogenetic Tree(s): OG_06_0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s05043p00002670
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT1G09310 No alias Protein of unknown function, DUF538 0.06 Archaeplastida
AT1G30020 No alias Protein of unknown function, DUF538 0.04 Archaeplastida
AT1G56580 SVB Protein of unknown function, DUF538 0.02 Archaeplastida
AT4G24130 No alias Protein of unknown function, DUF538 0.04 Archaeplastida
AT5G49600 No alias Protein of unknown function, DUF538 0.02 Archaeplastida
Gb_12297 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_40921 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g46390.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g49790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g02690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g02700.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g02850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g02870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g02880.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g02900.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g02920.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g02940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g37400.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g38210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g38220.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g37650.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10435514g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10435514g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10435514g0030 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_120712g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_128814g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_304675g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_440140g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_4522g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_500179g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_5629g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_73238g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8097895g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_813524g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_920567g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_924621g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9395g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c10_4780V3.1 No alias Protein of unknown function, DUF538 0.03 Archaeplastida
Pp3c17_12850V3.1 No alias Protein of unknown function, DUF538 0.03 Archaeplastida
Smo130246 No alias No description available 0.04 Archaeplastida
Solyc01g100750.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g100770.2.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc02g076890.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018189_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020996_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030691_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032489_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e032715_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008987 quinolinate synthetase A activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009435 NAD biosynthetic process IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0019674 NAD metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007493 DUF538 27 140
No external refs found!