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  5. AT1G65110

AT1G65110


Description : Ubiquitin carboxyl-terminal hydrolase-related protein


Gene families : OG0008122 (Archaeplastida) Phylogenetic Tree(s): OG0008122_tree ,
OG_05_0006728 (LandPlants) Phylogenetic Tree(s): OG_05_0006728_tree ,
OG_06_0004261 (SeedPlants) Phylogenetic Tree(s): OG_06_0004261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G65110
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G52450 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.04 Archaeplastida
AT1G65120 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.01 Archaeplastida
AT2G34240 No alias Protein with domains of unknown function DUF627 and DUF632 0.01 Archaeplastida
AT5G61950 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 781 1069
IPR006866 DUF627_N 9 115
IPR006865 DUF629 148 613
No external refs found!