1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s05659p00002430

AMTR_s05659p00002430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold05659.2

Description : Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp. japonica


Gene families : OG0003080 (Archaeplastida) Phylogenetic Tree(s): OG0003080_tree ,
OG_05_0002809 (LandPlants) Phylogenetic Tree(s): OG_05_0002809_tree ,
OG_06_0009126 (SeedPlants) Phylogenetic Tree(s): OG_06_0009126_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s05659p00002430
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
ATMG00160 COX2 cytochrome oxidase 2 0.04 Archaeplastida
ATMG01280 ORF291 Cytochrome C oxidase subunit II-like, transmembrane domain 0.04 Archaeplastida
Gb_08948 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 Archaeplastida
Gb_17977 No alias Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc00g500101.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 Archaeplastida
Solyc00g500118.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 Archaeplastida
Solyc00g500244.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 Archaeplastida
Solyc00g500275.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 Archaeplastida
Solyc00g500359.1.1 No alias Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 Archaeplastida
Solyc09g015880.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEA Interproscan
MF GO:0005507 copper ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042773 ATP synthesis coupled electron transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002429 CcO_II-like_C 1 57
No external refs found!