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  5. Cpa|evm.model.tig00000025.50

Cpa|evm.model.tig00000025.50


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component


Gene families : OG0002284 (Archaeplastida) Phylogenetic Tree(s): OG0002284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000025.50
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269670 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
AMTR_s00060p00174830 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
AMTR_s00135p00091990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
AT1G43170 RP1, RPL3A, emb2207, ARP1 ribosomal protein 1 0.21 Archaeplastida
Cre10.g417700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
GSVIVT01023241001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01034555001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
Gb_35746 No alias component RPL3 of LSU proteome component 0.08 Archaeplastida
LOC_Os11g06750.1 No alias component RPL3 of LSU proteome component 0.27 Archaeplastida
LOC_Os12g07010.1 No alias component RPL3 of LSU proteome component 0.35 Archaeplastida
MA_10432758g0010 No alias component RPL3 of LSU proteome component 0.14 Archaeplastida
MA_124178g0010 No alias component RPL3 of LSU proteome component 0.14 Archaeplastida
Mp1g18990.1 No alias component RPL3 of LSU proteome component 0.39 Archaeplastida
Pp3c10_25460V3.1 No alias R-protein L3 B 0.13 Archaeplastida
Pp3c5_27000V3.1 No alias R-protein L3 B 0.07 Archaeplastida
Pp3c5_27030V3.1 No alias R-protein L3 B 0.11 Archaeplastida
Smo270706 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Solyc01g103510.4.1 No alias component RPL3 of LSU proteome component 0.02 Archaeplastida
Solyc01g104590.3.1 No alias component RPL3 of LSU proteome component 0.31 Archaeplastida
Zm00001e001224_P002 No alias component RPL3 of LSU proteome component 0.16 Archaeplastida
Zm00001e008122_P001 No alias component RPL3 of LSU proteome component 0.13 Archaeplastida
Zm00001e008127_P001 No alias component RPL3 of LSU proteome component 0.19 Archaeplastida
Zm00001e009061_P001 No alias component RPL3 of LSU proteome component 0.18 Archaeplastida
Zm00001e009065_P002 No alias component RPL3 of LSU proteome component 0.24 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 1 367
No external refs found!