Cpa|evm.model.tig00000076.26


No description available


Gene families : OG0006068 (Archaeplastida) Phylogenetic Tree(s): OG0006068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000076.26
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00199900 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.atypical kinase... 0.04 Archaeplastida
GSVIVT01031879001 No alias Protein modification.phosphorylation.atypical kinase... 0.04 Archaeplastida
Gb_14475 No alias SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK) 0.02 Archaeplastida
LOC_Os03g52794.1 No alias SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK) 0.04 Archaeplastida
MA_10363121g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_10428117g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_124366g0010 No alias SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK) 0.04 Archaeplastida
Smo88215 No alias Protein modification.phosphorylation.atypical kinase... 0.02 Archaeplastida
Solyc01g109080.3.1 No alias SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK) 0.03 Archaeplastida
Zm00001e005605_P001 No alias SMG1 Nonsense-Mediated mRNA Decay kinase. protein kinase (PIKK) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
MF GO:0004674 protein serine/threonine kinase activity IEA Interproscan
BP GO:0016310 phosphorylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR031559 SMG1 584 692
No external refs found!