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  5. Cpa|evm.model.tig00000144.188

Cpa|evm.model.tig00000144.188


Description : ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana


Gene families : OG0000082 (Archaeplastida) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000144.188
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00063470 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.RNA-independent... 0.02 Archaeplastida
AMTR_s00086p00165640 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.01 Archaeplastida
AT4G31900 PKR2 chromatin remodeling factor, putative 0.01 Archaeplastida
AT5G18620 CHR17 chromatin remodeling factor17 0.02 Archaeplastida
AT5G19310 No alias Homeotic gene regulator 0.03 Archaeplastida
Cre03.g158550 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.06 Archaeplastida
GSVIVT01012117001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.01 Archaeplastida
GSVIVT01018979001 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_16888 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_18673 No alias chromatin remodeling factor (Chd3/Mi-2) 0.01 Archaeplastida
LOC_Os03g51230.2 No alias chromatin remodeling factor (DDM1) 0.01 Archaeplastida
LOC_Os06g01320.1 No alias Helicase protein MOM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g27060.1 No alias chromatin remodeling factor (DDM1) 0.02 Archaeplastida
MA_104034g0010 No alias chromatin remodeling factor (DDM1) 0.04 Archaeplastida
MA_10437250g0010 No alias Probable helicase CHR10 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_42406g0010 No alias chromatin remodeling factor (DDM1) 0.02 Archaeplastida
Mp4g12200.1 No alias chromatin remodeling factor (DDM1) 0.04 Archaeplastida
Pp3c18_19045V3.1 No alias chromatin remodeling factor CHD3 (PICKLE) 0.02 Archaeplastida
Smo102612 No alias Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g085390.4.1 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Zm00001e011541_P001 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Zm00001e017643_P001 No alias chromatin remodeling factor (Iswi) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 573 685
No external refs found!